Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | COO09_13820 | Not Available | Positive | 2905430 - 2907925 | 91653.4 |
| prolipoprotein diacylglyceryl transferase | COO09_13825 | Not Available | Positive | 2908123 - 2908962 | 30852.9 |
| sam-dependent methyltransferase | COO09_13830 | Not Available | Positive | 2909023 - 2910087 | 38582.7 |
| histidine kinase | COO09_13835 | Not Available | Negative | 2910215 - 2910655 | 16026.9 |
| hypothetical protein | COO09_13840 | Not Available | Negative | 2910686 - 2911375 | 24709.9 |
| response regulator | COO09_13845 | Not Available | Negative | 2911359 - 2911778 | 15523.6 |
| pyruvate dehydrogenase complex e1 component subunit beta | COO09_13850 | Not Available | Negative | 2911875 - 2913299 | 50505.4 |
| pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alpha | COO09_13855 | Not Available | Negative | 2913299 - 2914405 | 40359.1 |
| septation ring formation regulator ezra | COO09_13860 | Not Available | Negative | 2914501 - 2914809 | 11345.9 |
| uracil-dna glycosylase | COO09_13865 | Not Available | Negative | 2914906 - 2915538 | 22365.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
