Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anti-sigma factor antagonist | COO09_13770 | Not Available | Positive | 2895401 - 2895739 | 11636.0 |
| mbl fold metallo-hydrolase | COO09_13775 | Not Available | Positive | 2895825 - 2896793 | 35577.8 |
| hypothetical protein | COO09_13780 | Not Available | Positive | 2896810 - 2898822 | 71643.2 |
| ompa family protein | COO09_13785 | Not Available | Negative | 2898826 - 2899389 | 20354.2 |
| hypothetical protein | COO09_13790 | Not Available | Negative | 2899410 - 2899844 | 15420.9 |
| atp-binding protein | COO09_13795 | Not Available | Positive | 2899892 - 2900308 | 14500.2 |
| atp-binding protein | COO09_13800 | Not Available | Negative | 2900315 - 2901649 | 47570.6 |
| sigma-54-dependent fis family transcriptional regulator | COO09_13805 | Not Available | Negative | 2901639 - 2903024 | 50073.1 |
| efflux rnd transporter periplasmic adaptor subunit | COO09_13810 | Not Available | Positive | 2903290 - 2904600 | 47845.3 |
| abc transporter atp-binding protein | COO09_13815 | Not Available | Positive | 2904612 - 2905292 | 24640.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
