Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin domain-containing protein | COO09_13720 | Not Available | Positive | 2883407 - 2884003 | 21646.5 |
| gntr family transcriptional regulator | COO09_13725 | Not Available | Positive | 2884114 - 2884890 | 28908.7 |
| ethanolamine ammonia-lyase subunit eutc | COO09_13730 | Not Available | Negative | 2884917 - 2885684 | 27061.5 |
| ethanolamine ammonia lyase large subunit | COO09_13735 | Not Available | Negative | 2885668 - 2887059 | 50367.3 |
| llm class flavin-dependent oxidoreductase | COO09_13740 | Not Available | Negative | 2887199 - 2888521 | 49064.4 |
| quinonprotein alcohol dehydrogenase | COO09_13745 | Not Available | Negative | 2888611 - 2890776 | 77353.1 |
| hypothetical protein | COO09_13750 | Not Available | Negative | 2890760 - 2892217 | 51841.6 |
| hypothetical protein | COO09_13755 | Not Available | Negative | 2892320 - 2893819 | 55081.0 |
| hypothetical protein | COO09_13760 | Not Available | Positive | 2893917 - 2894498 | 21794.7 |
| glutamine amidotransferase | COO09_13765 | Not Available | Positive | 2894602 - 2895297 | 25248.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
