Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| p-type conjugative transfer protein trbg | COO09_13620 | Not Available | Positive | 2860780 - 2861796 | 36409.3 |
| conjugal transfer protein trai | COO09_13625 | Not Available | Positive | 2861793 - 2863016 | 42913.1 |
| duf2274 domain-containing protein | COO09_13630 | Not Available | Positive | 2863013 - 2863234 | 7978.84 |
| hypothetical protein | COO09_13635 | Not Available | Negative | 2863249 - 2863557 | 10895.1 |
| lysr family transcriptional regulator | COO09_13640 | Not Available | Negative | 2863589 - 2864512 | 33466.4 |
| hypothetical protein | COO09_13645 | Not Available | Negative | 2865025 - 2865372 | 12073.0 |
| duf1259 domain-containing protein | COO09_13650 | Not Available | Negative | 2865446 - 2866327 | 31170.6 |
| dna-binding response regulator | COO09_13655 | Not Available | Positive | 2866590 - 2867258 | 24486.7 |
| sensor histidine kinase | COO09_13660 | Not Available | Positive | 2867239 - 2868630 | 49814.3 |
| hypothetical protein | COO09_13665 | Not Available | Negative | 2868698 - 2869813 | 40166.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
