Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trag | COO09_13570 | Not Available | Positive | 2851221 - 2853194 | 71995.2 |
| copg family transcriptional regulator | COO09_13575 | Not Available | Positive | 2853204 - 2853635 | 16376.6 |
| p-type conjugative transfer atpase trbb | COO09_13580 | Not Available | Positive | 2853805 - 2854791 | 34557.9 |
| conjugal transfer protein trbc | COO09_13585 | Not Available | Positive | 2854788 - 2855120 | 11377.1 |
| conjugal transfer protein | COO09_13590 | Not Available | Positive | 2855120 - 2855392 | 9790.11 |
| conjugal transfer protein trbe | COO09_13595 | Not Available | Positive | 2855389 - 2857824 | 89050.9 |
| p-type conjugative transfer protein trbj | COO09_13600 | Not Available | Positive | 2857821 - 2858537 | 25421.2 |
| hypothetical protein | COO09_13605 | Not Available | Positive | 2858542 - 2858793 | 8628.37 |
| p-type conjugative transfer protein trbl | COO09_13610 | Not Available | Positive | 2858790 - 2860094 | 42967.2 |
| conjugal transfer protein trbf | COO09_13615 | Not Available | Positive | 2860100 - 2860783 | 25283.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
