Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf945 domain-containing protein | COO09_13520 | Not Available | Positive | 2843926 - 2844768 | 32026.0 |
| duf2285 domain-containing protein | COO09_13525 | Not Available | Positive | 2845290 - 2845562 | 10142.7 |
| hypothetical protein | COO09_13530 | Not Available | Positive | 2845697 - 2845918 | 8147.69 |
| duf2285 domain-containing protein | COO09_13535 | Not Available | Positive | 2846073 - 2846480 | 15349.8 |
| dna-binding protein | COO09_13540 | Not Available | Positive | 2846609 - 2846875 | 9843.66 |
| duf2840 domain-containing protein | COO09_13545 | Not Available | Positive | 2846872 - 2847378 | 19345.2 |
| conjugal transfer protein | COO09_13550 | Not Available | Positive | 2847375 - 2847920 | 19453.7 |
| duf736 domain-containing protein | COO09_13555 | Not Available | Positive | 2847956 - 2848291 | 12251.0 |
| lytic transglycosylase | COO09_13560 | Not Available | Positive | 2848296 - 2849207 | 31291.0 |
| type vi secretion protein | COO09_13565 | Not Available | Positive | 2849446 - 2851206 | 64104.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
