Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent succinate-semialdehyde dehydrogenase | COO09_13415 | Not Available | Positive | 2821953 - 2823386 | 50841.9 |
| aspartate aminotransferase family protein | COO09_13420 | Not Available | Negative | 2823494 - 2824831 | 47500.2 |
| s9 family peptidase | COO09_13425 | Not Available | Negative | 2825193 - 2827262 | 76810.0 |
| Trna-arg | Not Available | Not Available | Positive | 2827845 - 2827921 | Not Available |
| recombinase family protein | COO09_13440 | Not Available | Negative | 2827877 - 2829574 | 63612.5 |
| toxin | COO09_13445 | Not Available | Negative | 2829909 - 2830400 | 18514.1 |
| abrb family transcriptional regulator | COO09_13450 | Not Available | Negative | 2830400 - 2830726 | 11533.7 |
| ntpase kap | COO09_13455 | Not Available | Positive | 2830987 - 2832945 | 70825.5 |
| hypothetical protein | COO09_13460 | Not Available | Positive | 2832945 - 2833829 | 29847.7 |
| hypothetical protein | COO09_13465 | Not Available | Positive | 2833826 - 2835175 | 48981.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
