Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphotransferase family protein | COO09_13365 | Not Available | Negative | 2812686 - 2813645 | 35385.0 |
| 3-oxoacyl-acp reductase | COO09_13370 | Not Available | Negative | 2813765 - 2814508 | 25932.8 |
| acyl-coa dehydrogenase | COO09_13375 | Not Available | Negative | 2814513 - 2815793 | 47877.3 |
| hypothetical protein | COO09_13380 | Not Available | Positive | 2815967 - 2816458 | 18050.4 |
| hypothetical protein | COO09_13385 | Not Available | Positive | 2816473 - 2816790 | 11829.9 |
| mfs transporter | COO09_13390 | Not Available | Positive | 2816794 - 2818068 | 44737.4 |
| nadp-dependent oxidoreductase | COO09_13395 | Not Available | Negative | 2818116 - 2819111 | 36153.6 |
| sugar phosphate isomerase/epimerase | COO09_13400 | Not Available | Negative | 2819108 - 2820016 | 31467.4 |
| duf2889 domain-containing protein | COO09_13405 | Not Available | Positive | 2819934 - 2820908 | 35641.4 |
| fadr family transcriptional regulator | COO09_13410 | Not Available | Positive | 2820919 - 2821668 | 27651.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
