Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase | COO09_13315 | Not Available | Positive | 2799269 - 2800090 | 28620.8 |
| cytochrome p450 | COO09_13320 | Not Available | Negative | 2800158 - 2801411 | 48132.7 |
| glucose-methanol-choline oxidoreductase | COO09_13325 | Not Available | Negative | 2801433 - 2803055 | 58175.8 |
| hypothetical protein | COO09_13330 | Not Available | Positive | 2803187 - 2805793 | 93400.1 |
| fad-binding dehydrogenase | COO09_13335 | Not Available | Negative | 2805949 - 2807286 | 46421.7 |
| helix-turn-helix transcriptional regulator | COO09_13340 | Not Available | Positive | 2807654 - 2808436 | 29218.7 |
| acyl-coa dehydrogenase | COO09_13345 | Not Available | Negative | 2808471 - 2809679 | 44014.7 |
| hypothetical protein | COO09_13350 | Not Available | Positive | 2809625 - 2810947 | 47337.0 |
| acetyl-coa acetyltransferase | COO09_13355 | Not Available | Negative | 2811111 - 2812253 | 39896.3 |
| dna-binding protein | COO09_13360 | Not Available | Negative | 2812250 - 2812666 | 15224.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
