Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | COO09_13265 | Not Available | Negative | 2788157 - 2789449 | 48250.8 |
| helix-turn-helix transcriptional regulator | COO09_13270 | Not Available | Negative | 2789485 - 2790273 | 28955.9 |
| luxr family transcriptional regulator | COO09_13275 | Not Available | Negative | 2790386 - 2791165 | 28888.7 |
| alcohol dehydrogenase | COO09_13280 | Not Available | Positive | 2791292 - 2792449 | 40716.9 |
| sugar phosphate isomerase/epimerase | COO09_13285 | Not Available | Negative | 2792428 - 2793249 | 28586.3 |
| amidohydrolase | COO09_13290 | Not Available | Positive | 2793439 - 2794611 | 44382.4 |
| coa transferase | COO09_13295 | Not Available | Positive | 2794759 - 2796093 | 49300.1 |
| carnitine dehydratase | COO09_13300 | Not Available | Positive | 2796093 - 2797307 | 44268.5 |
| hypothetical protein | COO09_13305 | Not Available | Positive | 2797324 - 2797635 | 10368.3 |
| amp-dependent synthetase | COO09_13310 | Not Available | Positive | 2797648 - 2799132 | 52979.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
