Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | COO09_13165 | Not Available | Positive | 2765912 - 2766559 | 22566.3 |
| hypothetical protein | COO09_13170 | Not Available | Positive | 2766661 - 2766915 | 9310.18 |
| coa transferase | COO09_13175 | Not Available | Positive | 2767431 - 2768618 | 40821.0 |
| hydrolase | COO09_13180 | Not Available | Positive | 2768612 - 2769994 | 49590.1 |
| llm class f420-dependent oxidoreductase | COO09_13185 | Not Available | Negative | 2769989 - 2770843 | 30451.6 |
| hypothetical protein | COO09_13190 | Not Available | Negative | 2770875 - 2772056 | 39791.5 |
| 3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-coa hydratase | COO09_13195 | Not Available | Negative | 2772142 - 2772987 | 30491.2 |
| 3-oxoacyl-acp reductase | COO09_13200 | Not Available | Positive | 2773122 - 2773949 | 28693.4 |
| acetyl-coa c-acyltransferase | COO09_13205 | Not Available | Positive | 2773963 - 2775171 | 41647.8 |
| 3-beta hydroxysteroid dehydrogenase | COO09_13210 | Not Available | Positive | 2775164 - 2775940 | 26384.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
