Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2061 domain-containing protein | COO09_13110 | Not Available | Positive | 2753548 - 2753790 | 8495.47 |
| hypothetical protein | COO09_13115 | Not Available | Positive | 2754173 - 2755132 | 35382.8 |
| hydrolase | COO09_13120 | Not Available | Positive | 2755318 - 2757693 | 85111.1 |
| recombinase family protein | COO09_13130 | Not Available | Positive | 2758757 - 2760376 | 60643.9 |
| tryptophan-rich sensory protein | COO09_13135 | Not Available | Negative | 2760257 - 2760814 | 20549.9 |
| tlya family rrna (cytidine-2'-o)-methyltransferase | COO09_13140 | Not Available | Negative | 2760807 - 2761538 | 26025.2 |
| Trna-val | Not Available | Not Available | Positive | 2761583 - 2761657 | Not Available |
| hypothetical protein | COO09_13150 | Not Available | Negative | 2761850 - 2763352 | 57078.5 |
| hypothetical protein | COO09_13155 | Not Available | Negative | 2763349 - 2763606 | 8796.58 |
| dna methylase n-4 | COO09_13160 | Not Available | Negative | 2763974 - 2765383 | 51978.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
