Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-3-methyladenine glycosylase i | COO09_12910 | Not Available | Negative | 2713424 - 2713984 | 20738.8 |
| duf1810 domain-containing protein | COO09_12915 | Not Available | Negative | 2713981 - 2714412 | 15890.0 |
| excinuclease abc subunit uvrb | COO09_12920 | Not Available | Negative | 2715042 - 2717225 | 82320.9 |
| hypothetical protein | COO09_12925 | Not Available | Positive | 2717282 - 2718124 | 31143.0 |
| duf3617 domain-containing protein | COO09_12930 | Not Available | Positive | 2718177 - 2718632 | 16196.5 |
| acetyltransferase | COO09_12935 | Not Available | Positive | 2718623 - 2719432 | 29864.6 |
| alpha-ketoglutarate transporter | COO09_12940 | Not Available | Positive | 2719548 - 2720843 | 46836.4 |
| hypothetical protein | COO09_12945 | Not Available | Positive | 2720848 - 2721594 | 27342.2 |
| hypothetical protein | COO09_12950 | Not Available | Positive | 2721781 - 2722056 | 9451.64 |
| hypothetical protein | COO09_12955 | Not Available | Negative | 2722118 - 2723182 | 39292.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
