Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hnh endonuclease | COO09_12860 | Not Available | Positive | 2705218 - 2705493 | 10367.5 |
| pyridoxamine 5'-phosphate oxidase family protein | COO09_12865 | Not Available | Positive | 2705808 - 2706461 | 23959.4 |
| lysr family transcriptional regulator | COO09_12870 | Not Available | Negative | 2706456 - 2707382 | 33948.9 |
| nad(p)-dependent oxidoreductase | COO09_12875 | Not Available | Positive | 2707479 - 2708270 | 27500.8 |
| gnat family n-acetyltransferase | COO09_12880 | Not Available | Positive | 2708313 - 2709065 | 26093.2 |
| dehydrogenase | COO09_12885 | Not Available | Negative | 2709008 - 2710129 | 39311.8 |
| hypothetical protein | COO09_12890 | Not Available | Negative | 2710187 - 2711437 | 45466.6 |
| hypothetical protein | COO09_12895 | Not Available | Negative | 2711503 - 2711937 | 16460.3 |
| hypothetical protein | COO09_12900 | Not Available | Positive | 2712045 - 2712803 | 25388.8 |
| arac family transcriptional regulator | COO09_12905 | Not Available | Negative | 2712755 - 2713366 | 21136.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
