Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsr family transcriptional regulator | COO09_12740 | Not Available | Positive | 2682199 - 2682678 | 18027.0 |
| tonb-dependent receptor | COO09_12745 | Not Available | Positive | 2683016 - 2686369 | 119280.0 |
| duf418 domain-containing protein | COO09_12755 | Not Available | Positive | 2687644 - 2688960 | 48255.0 |
| llm class f420-dependent oxidoreductase | COO09_12760 | Not Available | Negative | 2688952 - 2689905 | 34212.6 |
| error-prone dna polymerase | COO09_12765 | Not Available | Negative | 2689967 - 2693506 | 131465.0 |
| type ii toxin-antitoxin system rele/pare family toxin | COO09_12785 | Not Available | Negative | 2696026 - 2696310 | 10572.8 |
| type ii toxin-antitoxin system antitoxin, relb/dinj family | COO09_12790 | Not Available | Negative | 2696291 - 2696596 | 11037.3 |
| lysr family transcriptional regulator | COO09_12795 | Not Available | Negative | 2696642 - 2697517 | 31303.0 |
| subclass b3 metallo-beta-lactamase | COO09_12800 | Not Available | Positive | 2697627 - 2698556 | 32940.6 |
| duf2063 domain-containing protein | COO09_12805 | Not Available | Negative | 2698724 - 2699470 | 26453.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
