Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate abc transporter permease subunit pstc | COO09_12690 | Not Available | Negative | 2670653 - 2671606 | 33242.2 |
| phosphate abc transporter substrate-binding protein psts | COO09_12695 | Not Available | Negative | 2671681 - 2672730 | 36045.7 |
| hypothetical protein | COO09_12700 | Not Available | Positive | 2673042 - 2674553 | 54393.0 |
| hypothetical protein | COO09_12705 | Not Available | Positive | 2674701 - 2675069 | 13091.3 |
| polyketide cyclase | COO09_12710 | Not Available | Negative | 2675181 - 2675630 | 17000.2 |
| hypothetical protein | COO09_12715 | Not Available | Negative | 2675696 - 2676940 | 45055.3 |
| ycii family protein | COO09_12720 | Not Available | Negative | 2676943 - 2677314 | 12966.5 |
| xre family transcriptional regulator | COO09_12725 | Not Available | Negative | 2677387 - 2678031 | 22949.2 |
| prepilin peptidase | COO09_12730 | Not Available | Negative | 2678053 - 2678811 | 25964.6 |
| bifunctional proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase puta | COO09_12735 | Not Available | Negative | 2678992 - 2682090 | 109931.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
