Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent succinate-semialdehyde dehydrogenase | COO09_12485 | Not Available | Negative | 2628740 - 2630176 | 51095.1 |
| marr family transcriptional regulator | COO09_12490 | Not Available | Positive | 2630273 - 2630878 | 22521.1 |
| tonb-dependent receptor | COO09_12495 | Not Available | Negative | 2630914 - 2633379 | 89173.3 |
| flavin reductase family protein | COO09_12500 | Not Available | Negative | 2633443 - 2634087 | 23110.0 |
| hypothetical protein | COO09_12505 | Not Available | Negative | 2634090 - 2634977 | 31863.2 |
| flavin reductase | COO09_12510 | Not Available | Negative | 2634983 - 2635510 | 18636.1 |
| pyoverdin chromophore biosynthetic protein pvcc | COO09_12515 | Not Available | Negative | 2635491 - 2637059 | 58283.2 |
| glyoxalase | COO09_12520 | Not Available | Negative | 2637108 - 2637554 | 16247.2 |
| hypothetical protein | COO09_12525 | Not Available | Negative | 2637758 - 2638378 | 23345.2 |
| hypothetical protein | COO09_12530 | Not Available | Negative | 2638424 - 2638846 | 15717.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
