Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent acyl-coa ligase | COO09_12430 | Not Available | Negative | 2615755 - 2617341 | 58025.5 |
| hypothetical protein | COO09_12435 | Not Available | Negative | 2617424 - 2618935 | 55228.6 |
| glyoxalase | COO09_12440 | Not Available | Negative | 2618987 - 2619946 | 34893.3 |
| faa hydrolase family protein | COO09_12445 | Not Available | Negative | 2619951 - 2620919 | 34520.0 |
| lipid-transfer protein | COO09_12450 | Not Available | Negative | 2620948 - 2622120 | 41393.4 |
| arac family transcriptional regulator | COO09_12455 | Not Available | Positive | 2622416 - 2623372 | 34799.7 |
| amidohydrolase | COO09_12460 | Not Available | Negative | 2623406 - 2624395 | 37365.6 |
| is3 family transposase | COO09_12470 | Not Available | Positive | 2625854 - 2627082 | 46253.3 |
| 2-keto-3-deoxy-l-rhamnonate aldolase | COO09_12475 | Not Available | Negative | 2627140 - 2627937 | 27550.9 |
| 2-oxo-hepta-3-ene-1,7-dioic acid hydratase | COO09_12480 | Not Available | Negative | 2627931 - 2628746 | 29397.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
