Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | COO09_12065 | Not Available | Positive | 2541647 - 2541877 | 8841.46 |
| repb plasmid partition | COO09_12070 | Not Available | Negative | 2542103 - 2543038 | 34161.4 |
| chromosome partitioning protein parb | COO09_12075 | Not Available | Negative | 2543031 - 2543933 | 33353.9 |
| recombinase family protein | COO09_12080 | Not Available | Negative | 2543933 - 2545426 | 56103.5 |
| hypothetical protein | COO09_12085 | Not Available | Positive | 2545619 - 2546260 | 23873.6 |
| helicase iv | COO09_12090 | Not Available | Positive | 2546462 - 2549146 | 99791.3 |
| hypothetical protein | COO09_12100 | Not Available | Negative | 2549600 - 2550190 | 19042.0 |
| adenylosuccinate lyase | COO09_12105 | Not Available | Positive | 2550471 - 2551769 | 48137.0 |
| glycosyl transferase | COO09_12110 | Not Available | Positive | 2551822 - 2552817 | 36619.1 |
| sulfotransferase | COO09_12115 | Not Available | Positive | 2552856 - 2553686 | 31656.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
