Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | COO09_12010 | Not Available | Negative | 2531156 - 2531980 | 30670.1 |
| is21 family transposase | COO09_12015 | Not Available | Negative | 2532013 - 2533500 | 54620.2 |
| gentisate 1,2-dioxygenase | COO09_12020 | Not Available | Positive | 2533912 - 2534964 | 38896.3 |
| fumarylacetoacetate hydrolase | COO09_12025 | Not Available | Positive | 2534961 - 2535656 | 25167.0 |
| glutathione s-transferase family protein | COO09_12030 | Not Available | Positive | 2535712 - 2536452 | 28269.8 |
| glutathione-disulfide reductase | COO09_12035 | Not Available | Positive | 2536484 - 2537830 | 48328.9 |
| hypothetical protein | COO09_12040 | Not Available | Positive | 2537884 - 2538075 | 7347.74 |
| hypothetical protein | COO09_12045 | Not Available | Negative | 2538132 - 2538446 | 10144.7 |
| is21 family transposase | COO09_12050 | Not Available | Positive | 2538564 - 2540075 | 57490.3 |
| atpase | COO09_12055 | Not Available | Positive | 2540062 - 2540790 | 26695.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
