Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2147 domain-containing protein | COO09_11960 | Not Available | Positive | 2522910 - 2523320 | 14804.8 |
| hypothetical protein | COO09_11965 | Not Available | Positive | 2523402 - 2523986 | 20928.1 |
| phospholipase d family protein | COO09_11970 | Not Available | Negative | 2524071 - 2525573 | 55093.8 |
| universal stress protein | COO09_11975 | Not Available | Negative | 2525618 - 2526475 | 31006.1 |
| l,d-transpeptidase | COO09_11980 | Not Available | Positive | 2526615 - 2527697 | 38401.2 |
| hypothetical protein | COO09_11985 | Not Available | Positive | 2527966 - 2528469 | 18754.4 |
| hypothetical protein | COO09_11990 | Not Available | Positive | 2528964 - 2529215 | 9475.48 |
| vit family protein | COO09_11995 | Not Available | Positive | 2529409 - 2530110 | 23940.2 |
| cytochrome b | COO09_12000 | Not Available | Positive | 2530183 - 2530872 | 24605.1 |
| hypothetical protein | COO09_12005 | Not Available | Negative | 2530903 - 2531082 | 6491.59 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
