Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein traf | COO09_11860 | Not Available | Positive | 2496707 - 2497579 | 32634.4 |
| hypothetical protein | COO09_11865 | Not Available | Positive | 2497576 - 2498160 | 20917.7 |
| conjugal transfer protein trah | COO09_11870 | Not Available | Positive | 2498206 - 2499630 | 51560.5 |
| conjugal transfer protein trag | COO09_11875 | Not Available | Positive | 2499645 - 2503415 | 132767.0 |
| hypothetical protein | COO09_11880 | Not Available | Negative | 2503412 - 2503870 | 17140.4 |
| hypothetical protein | COO09_11885 | Not Available | Positive | 2504468 - 2504821 | 12976.4 |
| nucleotidyl transferase abieii/abigii toxin family protein | COO09_11890 | Not Available | Negative | 2505035 - 2505955 | 34142.7 |
| hypothetical protein | COO09_11895 | Not Available | Negative | 2505960 - 2506745 | 29468.5 |
| luxr family transcriptional regulator | COO09_11900 | Not Available | Negative | 2506939 - 2507730 | 29333.3 |
| abc transporter permease | COO09_11905 | Not Available | Negative | 2508025 - 2509149 | 40722.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
