Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf5131 domain-containing protein | COO09_11705 | Not Available | Negative | 2470870 - 2471652 | 29834.7 |
| tyrosine protein phosphatase | COO09_11710 | Not Available | Positive | 2471957 - 2472550 | 21498.1 |
| transcriptional regulator | COO09_11715 | Not Available | Positive | 2472707 - 2473057 | 12993.7 |
| type ii toxin-antitoxin system hipa family toxin | COO09_11720 | Not Available | Positive | 2473054 - 2474355 | 47407.0 |
| single-stranded-dna-specific exonuclease recj | COO09_11730 | Not Available | Positive | 2475148 - 2476917 | 62112.4 |
| Trna-glu | Not Available | Not Available | Positive | 2477015 - 2477089 | Not Available |
| site-specific integrase | COO09_11740 | Not Available | Negative | 2477298 - 2478434 | 44065.8 |
| excisionase | COO09_11745 | Not Available | Negative | 2478395 - 2478598 | 7679.16 |
| hypothetical protein | COO09_11750 | Not Available | Positive | 2478987 - 2479454 | 15996.1 |
| molybdopterin-guanine dinucleotide biosynthesis protein moba | COO09_11755 | Not Available | Negative | 2479355 - 2480023 | 25032.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
