Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s26 family signal peptidase | COO09_11655 | Not Available | Positive | 2458958 - 2459542 | 21227.9 |
| lytic transglycosylase | COO09_11660 | Not Available | Positive | 2459530 - 2460105 | 20926.6 |
| hypothetical protein | COO09_11665 | Not Available | Positive | 2460296 - 2460682 | 14151.9 |
| duf3363 domain-containing protein | COO09_11670 | Not Available | Positive | 2460959 - 2462923 | 72848.6 |
| very short patch repair endonuclease | COO09_11675 | Not Available | Positive | 2463023 - 2463445 | 16456.2 |
| dna (cytosine-5-)-methyltransferase | COO09_11680 | Not Available | Positive | 2463442 - 2464629 | 44691.8 |
| hypothetical protein | COO09_11685 | Not Available | Positive | 2464626 - 2465396 | 28162.7 |
| hypothetical protein | COO09_11690 | Not Available | Positive | 2465450 - 2466250 | 29215.8 |
| helicase | COO09_11695 | Not Available | Positive | 2466243 - 2469563 | 120352.0 |
| hypothetical protein | COO09_11700 | Not Available | Negative | 2469621 - 2470850 | 46614.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
