Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2383 domain-containing protein | COO09_11455 | Not Available | Negative | 2419548 - 2420021 | 17625.8 |
| duf350 domain-containing protein | COO09_11460 | Not Available | Positive | 2420202 - 2420624 | 14757.6 |
| serine protease | COO09_11465 | Not Available | Positive | 2420626 - 2421456 | 29448.8 |
| hypothetical protein | COO09_11470 | Not Available | Negative | 2421607 - 2422194 | 18127.3 |
| serine protease | COO09_11475 | Not Available | Negative | 2422385 - 2423653 | 41689.4 |
| rna polymerase sigma factor | COO09_11480 | Not Available | Positive | 2423792 - 2424283 | 18438.3 |
| anti-sigma factor | COO09_11485 | Not Available | Positive | 2424280 - 2424990 | 25044.9 |
| hypothetical protein | COO09_11490 | Not Available | Positive | 2425115 - 2425330 | 7620.3 |
| malate synthase g | COO09_11495 | Not Available | Positive | 2425458 - 2427560 | 74983.6 |
| nudix hydrolase | COO09_11500 | Not Available | Negative | 2427741 - 2428274 | 19065.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
