Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | COO09_11250 | Not Available | Positive | 2373270 - 2375060 | 64806.4 |
| merr family transcriptional regulator | COO09_11255 | Not Available | Negative | 2375080 - 2375496 | 15200.8 |
| atp-dependent helicase | COO09_11265 | Not Available | Negative | 2376956 - 2378761 | 65943.1 |
| acyltransferase | COO09_11270 | Not Available | Positive | 2379040 - 2380200 | 41658.4 |
| nad(p)/fad-dependent oxidoreductase | COO09_11275 | Not Available | Negative | 2380146 - 2381333 | 42264.7 |
| peptide chain release factor 3 | COO09_11280 | Not Available | Positive | 2381453 - 2383036 | 58307.4 |
| hpp family protein | COO09_11285 | Not Available | Positive | 2383041 - 2383484 | 14952.0 |
| penicillin-binding protein | COO09_11290 | Not Available | Positive | 2383508 - 2384995 | 52926.4 |
| murein l,d-transpeptidase | COO09_11295 | Not Available | Positive | 2385053 - 2386045 | 35556.2 |
| m23 family peptidase | COO09_11300 | Not Available | Positive | 2386056 - 2386634 | 20235.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
