Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease | COO09_11200 | Not Available | Negative | 2359844 - 2360356 | 17886.8 |
| cytochrome c | COO09_11205 | Not Available | Negative | 2360375 - 2360809 | 14770.6 |
| monoamine oxidase | COO09_11210 | Not Available | Negative | 2360806 - 2362410 | 58484.8 |
| tonb-dependent receptor | COO09_11215 | Not Available | Negative | 2362503 - 2365058 | 90135.3 |
| merr family transcriptional regulator | COO09_11220 | Not Available | Negative | 2365601 - 2366008 | 15686.9 |
| long-chain fatty acid--coa ligase | COO09_11225 | Not Available | Negative | 2366012 - 2367736 | 62103.5 |
| aromatic hydrocarbon degradation protein | COO09_11230 | Not Available | Negative | 2367757 - 2369067 | 46027.7 |
| duf2147 domain-containing protein | COO09_11235 | Not Available | Negative | 2369100 - 2369504 | 14426.4 |
| acetyl-coa c-acyltransferase | COO09_11240 | Not Available | Positive | 2369671 - 2370807 | 38712.7 |
| 3-hydroxyacyl-coa dehydrogenase | COO09_11245 | Not Available | Positive | 2370810 - 2373116 | 81466.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
