Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pep-cterm sorting domain-containing protein | COO09_10890 | Not Available | Positive | 2285509 - 2286027 | 17923.7 |
| scp-like extracellular | COO09_10895 | Not Available | Negative | 2286181 - 2286723 | 19669.1 |
| glutamate--cysteine ligase | COO09_10900 | Not Available | Negative | 2287139 - 2288509 | 50968.8 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | COO09_10905 | Not Available | Negative | 2288621 - 2289361 | 26780.6 |
| 4-hydroxybenzoate octaprenyltransferase | COO09_10910 | Not Available | Positive | 2289288 - 2290319 | 37422.3 |
| modulator protein | COO09_10915 | Not Available | Positive | 2290379 - 2291725 | 46148.4 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | COO09_10920 | Not Available | Positive | 2291718 - 2292497 | 27662.9 |
| coa-binding protein | COO09_10925 | Not Available | Negative | 2292507 - 2292923 | 14509.6 |
| chromosome partitioning protein para | COO09_10930 | Not Available | Negative | 2292950 - 2293951 | 34499.8 |
| ftsh protease activity modulator hflk | COO09_10935 | Not Available | Positive | 2293957 - 2295072 | 40476.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
