Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is66 family insertion sequence hypothetical protein | COO09_10630 | Not Available | Negative | 2239791 - 2240132 | 12611.3 |
| is66 family insertion sequence hypothetical protein | COO09_10635 | Not Available | Negative | 2240129 - 2240476 | 12571.2 |
| transcriptional regulator | COO09_10645 | Not Available | Negative | 2241174 - 2241515 | 12785.7 |
| isoprenylcysteine carboxylmethyltransferase family protein | COO09_10650 | Not Available | Negative | 2241928 - 2242656 | 27313.3 |
| duf2933 domain-containing protein | COO09_10655 | Not Available | Negative | 2242653 - 2242922 | 9816.15 |
| mbl fold metallo-hydrolase | COO09_10660 | Not Available | Positive | 2243220 - 2244635 | 51364.4 |
| thymidine phosphorylase | COO09_10665 | Not Available | Positive | 2244632 - 2246170 | 53284.0 |
| phosphoribosylpyrophosphate synthetase | COO09_10670 | Not Available | Positive | 2246167 - 2247051 | 32094.6 |
| dna-binding response regulator | COO09_10680 | Not Available | Positive | 2248011 - 2248631 | 22267.1 |
| oleate hydratase | COO09_10685 | Not Available | Negative | 2248775 - 2250541 | 66507.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
