Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | COO09_10525 | Not Available | Negative | 2222801 - 2223070 | 9693.22 |
| type-f conjugative transfer system protein traw | COO09_10530 | Not Available | Negative | 2223070 - 2223726 | 23916.0 |
| type vi secretion protein | COO09_10535 | Not Available | Negative | 2223723 - 2224259 | 19397.6 |
| hypothetical protein | COO09_10540 | Not Available | Negative | 2224240 - 2224914 | 23574.5 |
| hypothetical protein | COO09_10545 | Not Available | Negative | 2224907 - 2225266 | 13276.3 |
| type-iv secretion system protein trac | COO09_10550 | Not Available | Negative | 2225272 - 2227863 | 95781.5 |
| conjugal transfer protein trav | COO09_10555 | Not Available | Negative | 2227865 - 2228860 | 33811.6 |
| disulfide bond formation protein dsbc | COO09_10560 | Not Available | Negative | 2228857 - 2229735 | 30992.3 |
| conjugal transfer protein trab | COO09_10565 | Not Available | Negative | 2229722 - 2231062 | 47041.6 |
| conjugal transfer protein trak | COO09_10570 | Not Available | Negative | 2231064 - 2231873 | 28709.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
