Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit delta' | COO09_10425 | Not Available | Positive | 2197672 - 2198649 | 35045.1 |
| methionine--trna ligase | COO09_10430 | Not Available | Positive | 2198716 - 2200287 | 58685.5 |
| tatd family deoxyribonuclease | COO09_10435 | Not Available | Positive | 2200287 - 2201063 | 28122.3 |
| mbl fold metallo-hydrolase | COO09_10440 | Not Available | Positive | 2201060 - 2201824 | 28223.3 |
| cusa/czca family heavy metal efflux rnd transporter | COO09_10445 | Not Available | Negative | 2202267 - 2205503 | 115625.0 |
| efflux rnd transporter periplasmic adaptor subunit | COO09_10450 | Not Available | Negative | 2205500 - 2206648 | 38428.5 |
| tolc family protein | COO09_10455 | Not Available | Negative | 2206645 - 2207913 | 44259.4 |
| hypothetical protein | COO09_10460 | Not Available | Negative | 2207968 - 2208336 | 12876.7 |
| mfs transporter | COO09_10465 | Not Available | Negative | 2208395 - 2209732 | 46474.2 |
| metal resistance protein | COO09_10470 | Not Available | Positive | 2209824 - 2210093 | 9718.68 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
