Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbamoyl-phosphate synthase large subunit | COO09_10225 | Not Available | Positive | 2155411 - 2158743 | 120483.0 |
| transcription elongation factor grea | COO09_10230 | Not Available | Positive | 2158827 - 2159303 | 17483.8 |
| rhomboid family intramembrane serine protease | COO09_10235 | Not Available | Positive | 2159321 - 2159947 | 21310.8 |
| duf4170 domain-containing protein | COO09_10240 | Not Available | Negative | 2159985 - 2160200 | 8188.77 |
| toluene tolerance protein | COO09_10245 | Not Available | Negative | 2160343 - 2160939 | 20987.7 |
| hypothetical protein | COO09_10250 | Not Available | Negative | 2161032 - 2161478 | 14846.5 |
| hypothetical protein | COO09_10255 | Not Available | Negative | 2161475 - 2162206 | 26460.4 |
| hypothetical protein | COO09_10260 | Not Available | Negative | 2162210 - 2162779 | 19105.3 |
| phosphopyruvate hydratase | COO09_10265 | Not Available | Positive | 2162934 - 2164214 | 44911.3 |
| sensor histidine kinase | COO09_10270 | Not Available | Positive | 2164317 - 2165549 | 43641.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
