Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad:protein fmn transferase | COO09_10175 | Not Available | Negative | 2145722 - 2146585 | 30334.3 |
| duf4198 domain-containing protein | COO09_10180 | Not Available | Negative | 2146675 - 2147529 | 29832.2 |
| duf2271 domain-containing protein | COO09_10185 | Not Available | Negative | 2147541 - 2148041 | 17353.1 |
| hypothetical protein | COO09_10190 | Not Available | Negative | 2148038 - 2148706 | 24159.4 |
| rna polymerase sigma factor rpod | COO09_10195 | Not Available | Negative | 2148868 - 2150895 | 76614.7 |
| dna primase | COO09_10200 | Not Available | Negative | 2150947 - 2152812 | 68125.3 |
| giy-yig nuclease family protein | COO09_10205 | Not Available | Negative | 2152809 - 2153156 | 13277.6 |
| aspartyl-trna amidotransferase | COO09_10210 | Not Available | Negative | 2153284 - 2153736 | 16453.1 |
| carbamoyl-phosphate synthase small subunit | COO09_10215 | Not Available | Positive | 2153874 - 2155052 | 41797.4 |
| ribonuclease e inhibitor rrab | COO09_10220 | Not Available | Positive | 2155049 - 2155411 | 13428.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
