Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | COO09_10075 | Not Available | Negative | 2124099 - 2125094 | 34730.2 |
| peptidylprolyl isomerase | COO09_10080 | Not Available | Negative | 2125099 - 2126418 | 47794.8 |
| lps-assembly protein lptd | COO09_10085 | Not Available | Negative | 2126516 - 2128756 | 82926.3 |
| leucyl aminopeptidase | COO09_10090 | Not Available | Positive | 2128909 - 2130381 | 51891.5 |
| 2-phospho-l-lactate guanylyltransferase | COO09_10095 | Not Available | Negative | 2130382 - 2130978 | 21141.7 |
| 2-phospho-l-lactate transferase | COO09_10100 | Not Available | Negative | 2130978 - 2131901 | 32009.6 |
| coenzyme f420-0:l-glutamate ligase | COO09_10105 | Not Available | Negative | 2131898 - 2132671 | 26924.9 |
| 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase | COO09_10110 | Not Available | Negative | 2132708 - 2135095 | 87145.1 |
| cytochrome ubiquinol oxidase subunit i | COO09_10115 | Not Available | Positive | 2135284 - 2136708 | 51651.4 |
| cytochrome d ubiquinol oxidase subunit ii | COO09_10120 | Not Available | Positive | 2136705 - 2137703 | 36251.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
