Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | COO09_00040 | Not Available | Positive | 8639 - 8923 | 11236.3 |
| hypothetical protein | COO09_00045 | Not Available | Positive | 8964 - 9683 | 27129.5 |
| host attachment protein | COO09_00050 | Not Available | Positive | 9722 - 10165 | 16349.3 |
| dna gyrase subunit a | COO09_00055 | Not Available | Negative | 10198 - 12954 | 100847.0 |
| hypothetical protein | COO09_00060 | Not Available | Negative | 13334 - 14095 | 27993.5 |
| hypothetical protein | COO09_00065 | Not Available | Positive | 14294 - 15568 | 44219.3 |
| lrp/asnc family transcriptional regulator | COO09_00070 | Not Available | Negative | 15678 - 16154 | 17231.8 |
| sensor histidine kinase | COO09_00075 | Not Available | Positive | 16261 - 18123 | 66613.6 |
| Trna-met | Not Available | Not Available | Positive | 18182 - 18257 | Not Available |
| radical sam protein | COO09_00085 | Not Available | Positive | 18514 - 20241 | 63633.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
