Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldolase | COO09_10025 | Not Available | Negative | 2113561 - 2114001 | 15147.5 |
| sensor histidine kinase | COO09_10030 | Not Available | Negative | 2114002 - 2115591 | 58570.5 |
| dna-binding response regulator | COO09_10035 | Not Available | Negative | 2115578 - 2116285 | 26804.1 |
| phosphoenolpyruvate carboxykinase | COO09_10040 | Not Available | Positive | 2116544 - 2118142 | 57684.6 |
| hypothetical protein | COO09_10045 | Not Available | Positive | 2118228 - 2118692 | 17608.8 |
| ggdef domain-containing protein | COO09_10050 | Not Available | Positive | 2118737 - 2119870 | 40315.7 |
| imp dehydrogenase | COO09_10055 | Not Available | Positive | 2120050 - 2121507 | 51348.9 |
| rna methyltransferase | COO09_10060 | Not Available | Positive | 2121511 - 2122680 | 41092.0 |
| hypothetical protein | COO09_10065 | Not Available | Positive | 2122716 - 2123246 | 18178.8 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | COO09_10070 | Not Available | Negative | 2123260 - 2124102 | 30006.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
