Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionyl-trna formyltransferase | COO09_09660 | Not Available | Positive | 2038544 - 2039470 | 32435.3 |
| trna pseudouridine(38-40) synthase trua | COO09_09665 | Not Available | Positive | 2039467 - 2040222 | 27479.8 |
| peptidylprolyl isomerase | COO09_09670 | Not Available | Positive | 2040219 - 2040635 | 14421.2 |
| asparagine synthetase b | COO09_09675 | Not Available | Negative | 2040643 - 2042544 | 69551.8 |
| glycosyl transferase family 1 | COO09_09680 | Not Available | Negative | 2042550 - 2043740 | 43573.8 |
| femab | COO09_09685 | Not Available | Negative | 2043740 - 2044789 | 37540.8 |
| polysaccharide deacetylase family protein | COO09_09690 | Not Available | Negative | 2044793 - 2045671 | 33075.3 |
| general secretion pathway protein gspa | COO09_09695 | Not Available | Negative | 2045646 - 2047160 | 53767.1 |
| hypothetical protein | COO09_09700 | Not Available | Negative | 2047292 - 2048905 | 57418.3 |
| hypothetical protein | COO09_09705 | Not Available | Negative | 2048902 - 2050026 | 39464.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
