Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytidine deaminase | COO09_09610 | Not Available | Positive | 2030086 - 2030538 | 15135.0 |
| dctp deaminase | COO09_09615 | Not Available | Positive | 2030555 - 2031109 | 20475.4 |
| nitronate monooxygenase | COO09_09620 | Not Available | Negative | 2031112 - 2032074 | 33609.4 |
| ribonuclease r | COO09_09625 | Not Available | Negative | 2032096 - 2034399 | 83972.9 |
| energy transducer tonb | COO09_09630 | Not Available | Positive | 2034538 - 2035266 | 26249.2 |
| fe2+-dependent dioxygenase | COO09_09635 | Not Available | Positive | 2035274 - 2035957 | 24977.8 |
| hypothetical protein | COO09_09640 | Not Available | Positive | 2036041 - 2036622 | 21033.9 |
| peptide deformylase | COO09_09645 | Not Available | Negative | 2036821 - 2037354 | 19975.1 |
| hypothetical protein | COO09_09650 | Not Available | Negative | 2037437 - 2037805 | 13549.8 |
| recombination protein recr | COO09_09655 | Not Available | Negative | 2037894 - 2038490 | 21313.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
