Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna repair protein rada | COO09_09460 | Not Available | Negative | 2000956 - 2002323 | 47863.9 |
| hypothetical protein | COO09_09465 | Not Available | Positive | 2002365 - 2002547 | 6874.43 |
| duf3376 domain-containing protein | COO09_09470 | Not Available | Positive | 2002705 - 2005041 | 85178.1 |
| ompa family protein | COO09_09475 | Not Available | Negative | 2005218 - 2006096 | 30848.9 |
| hypothetical protein | COO09_09480 | Not Available | Positive | 2006261 - 2006563 | 11150.1 |
| orotidine-5'-phosphate decarboxylase | COO09_09485 | Not Available | Positive | 2006560 - 2007240 | 23526.6 |
| hypothetical protein | COO09_09490 | Not Available | Negative | 2007438 - 2008694 | 45444.8 |
| tonb-dependent receptor | COO09_09495 | Not Available | Positive | 2009080 - 2011533 | 88598.3 |
| sulfite exporter taue/safe family protein | COO09_09500 | Not Available | Positive | 2011619 - 2012407 | 27679.6 |
| protein rard | COO09_09505 | Not Available | Positive | 2012491 - 2013345 | 30423.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
