Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | COO09_09210 | Not Available | Negative | 1952124 - 1953332 | 42951.1 |
| 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase | COO09_09215 | Not Available | Positive | 1953432 - 1954103 | 23208.2 |
| 4-oxalomesaconate tautomerase | COO09_09220 | Not Available | Positive | 1954096 - 1955151 | 36170.8 |
| 2-pyrone-4,6-dicarboxylate hydrolase | COO09_09225 | Not Available | Positive | 1955148 - 1956038 | 32988.5 |
| gtp-binding protein | COO09_09230 | Not Available | Negative | 1956077 - 1957018 | 33217.4 |
| hypothetical protein | COO09_09235 | Not Available | Negative | 1957048 - 1958325 | 47493.4 |
| hypothetical protein | COO09_09240 | Not Available | Negative | 1958356 - 1958871 | 18843.0 |
| (2fe-2s)-binding protein | COO09_09245 | Not Available | Negative | 1958888 - 1960180 | 47664.5 |
| (2fe-2s)-binding protein | COO09_09250 | Not Available | Positive | 1960623 - 1961903 | 47480.1 |
| nad(p)-dependent oxidoreductase | COO09_09255 | Not Available | Positive | 1961935 - 1962711 | 27103.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
