Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formyltetrahydrofolate deformylase | COO09_08805 | Not Available | Positive | 1860087 - 1860977 | 32660.4 |
| l-serine ammonia-lyase | COO09_08810 | Not Available | Positive | 1861050 - 1862426 | 47824.3 |
| arac family transcriptional regulator | COO09_08815 | Not Available | Positive | 1862497 - 1863528 | 37272.2 |
| hypothetical protein | COO09_08820 | Not Available | Positive | 1863649 - 1864830 | 43124.7 |
| tetr family transcriptional regulator | COO09_08825 | Not Available | Positive | 1864846 - 1865424 | 21486.6 |
| hypothetical protein | COO09_08830 | Not Available | Positive | 1865511 - 1866005 | 18289.6 |
| hypothetical protein | COO09_08835 | Not Available | Positive | 1866044 - 1866349 | 11384.9 |
| glyoxalase | COO09_08840 | Not Available | Positive | 1866382 - 1866822 | 16403.6 |
| acetyl-coa c-acyltransferase | COO09_08845 | Not Available | Negative | 1866874 - 1868070 | 41894.4 |
| 3-hydroxyacyl-coa dehydrogenase | COO09_08850 | Not Available | Negative | 1868082 - 1868999 | 32037.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
