Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | COO09_08650 | Not Available | Positive | 1820183 - 1820875 | 26178.8 |
| hypothetical protein | COO09_08655 | Not Available | Positive | 1821058 - 1822524 | 53223.1 |
| hypothetical protein | COO09_08660 | Not Available | Positive | 1822461 - 1824011 | 55270.5 |
| hypothetical protein | COO09_08665 | Not Available | Positive | 1823972 - 1826485 | 90034.9 |
| 50s ribosomal protein l7/l12 | COO09_08670 | Not Available | Negative | 1826770 - 1827153 | 12883.4 |
| 50s ribosomal protein l10 | COO09_08675 | Not Available | Negative | 1827220 - 1827735 | 17948.9 |
| cytochrome b | COO09_08680 | Not Available | Negative | 1828126 - 1828668 | 20003.9 |
| abc transporter atp-binding protein | COO09_08690 | Not Available | Positive | 1830976 - 1832865 | 67831.2 |
| hypothetical protein | COO09_08695 | Not Available | Negative | 1832903 - 1833835 | 35308.0 |
| hypothetical protein | COO09_08700 | Not Available | Positive | 1835732 - 1836022 | 11149.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
