Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf459 domain-containing protein | COO09_08550 | Not Available | Positive | 1791881 - 1793059 | 41193.4 |
| gdsl family lipase | COO09_08555 | Not Available | Positive | 1793056 - 1794474 | 49560.1 |
| mboat family protein | COO09_08560 | Not Available | Positive | 1794600 - 1795997 | 51623.1 |
| hypothetical protein | COO09_08565 | Not Available | Positive | 1796012 - 1796341 | 11747.8 |
| cys-trna(pro) deacylase | COO09_08570 | Not Available | Negative | 1796464 - 1797048 | 20121.4 |
| cell wall hydrolase | COO09_08575 | Not Available | Negative | 1797280 - 1797858 | 21029.1 |
| ai-2e family transporter | COO09_08580 | Not Available | Positive | 1798422 - 1799561 | 41327.5 |
| Trna-asp | Not Available | Not Available | Positive | 1799650 - 1799726 | Not Available |
| ggdef domain-containing protein | COO09_08590 | Not Available | Positive | 1799939 - 1801066 | 40282.4 |
| metallophosphoesterase | COO09_08595 | Not Available | Negative | 1801081 - 1801809 | 26765.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
