Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | COO09_00750 | Not Available | Negative | 156081 - 156428 | 12852.2 |
| nitroreductase | COO09_00755 | Not Available | Negative | 156471 - 157052 | 20878.0 |
| mfs transporter | COO09_00760 | Not Available | Positive | 157305 - 159086 | 63970.6 |
| amidohydrolase | COO09_00765 | Not Available | Positive | 159073 - 160494 | 50734.3 |
| amidohydrolase | COO09_00770 | Not Available | Positive | 160491 - 161777 | 43819.6 |
| phosphoglucosamine mutase | COO09_00775 | Not Available | Positive | 161975 - 163312 | 47375.2 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | COO09_00780 | Not Available | Positive | 163323 - 164117 | 26234.8 |
| rrf2 family transcriptional regulator | COO09_00785 | Not Available | Negative | 164138 - 164572 | 15476.0 |
| hypothetical protein | COO09_00790 | Not Available | Positive | 164621 - 165115 | 17907.7 |
| duf1698 domain-containing protein | COO09_00800 | Not Available | Positive | 165369 - 166229 | 32001.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
