Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid permease-associated protein | COO09_07840 | Not Available | Positive | 1643856 - 1645262 | 49960.2 |
| glutaryl-7-aca acylase | COO09_07845 | Not Available | Positive | 1645259 - 1647232 | 73453.6 |
| pyridoxal-5'-phosphate-dependent protein subunit beta | COO09_07850 | Not Available | Negative | 1647361 - 1648374 | 35501.7 |
| lysr family transcriptional regulator | COO09_07855 | Not Available | Positive | 1648788 - 1649723 | 33391.4 |
| hydroxymethylglutaryl-coa lyase | COO09_07865 | Not Available | Positive | 1651058 - 1651978 | 31880.4 |
| aminodeoxychorismate synthase, component i | COO09_07870 | Not Available | Negative | 1652054 - 1653247 | 43306.1 |
| acetyl-coa c-acyltransferase | COO09_07875 | Not Available | Negative | 1653254 - 1654462 | 42171.3 |
| iclr family transcriptional regulator | COO09_07880 | Not Available | Negative | 1654488 - 1655261 | 27920.5 |
| succinyl-coa--3-ketoacid-coa transferase | COO09_07885 | Not Available | Positive | 1655330 - 1656049 | 25753.9 |
| succinyl-coa--3-ketoacid-coa transferase | COO09_07890 | Not Available | Positive | 1656049 - 1656687 | 22191.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
