Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exopolyphosphatase | COO09_00600 | Not Available | Positive | 128090 - 129589 | 53959.3 |
| ribonuclease d | COO09_00605 | Not Available | Negative | 129713 - 130894 | 43772.9 |
| aspartate--trna ligase | COO09_00610 | Not Available | Positive | 130976 - 132754 | 65729.4 |
| polyphosphate kinase | COO09_00615 | Not Available | Positive | 132914 - 133699 | 30773.3 |
| hu family dna-binding protein | COO09_00620 | Not Available | Positive | 133830 - 134102 | 9528.44 |
| Trna-val | Not Available | Not Available | Positive | 134311 - 134385 | Not Available |
| aminoglycoside phosphotransferase | COO09_00630 | Not Available | Negative | 134472 - 135278 | 29995.5 |
| alpha/beta hydrolase | COO09_00635 | Not Available | Negative | 135620 - 136267 | 23805.6 |
| aminotransferase class v-fold plp-dependent enzyme | COO09_00640 | Not Available | Positive | 136378 - 137433 | 36140.2 |
| aminotransferase class v-fold plp-dependent enzyme | COO09_00645 | Not Available | Positive | 137586 - 138689 | 39685.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
