Ensifer sp. LCM 4579

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Ensifer

Description

Ensifer sp. LCM 4579 is characterized by having a single replicon, which suggests a streamlined genomic architecture that may contribute to its adaptability and efficiency in various environments. The genome of this strain is accessible through the accession number MDDV00000000.1, providing a resource for further research on its genetic makeup. This single-replicon structure could indicate a potential for more efficient replication and maintenance of genetic information compared to organisms with multiple replicons. Such a trait may also reflect evolutionary advantages in specific ecological niches where rapid adaptation is beneficial. In summary, the genomic characteristics of Ensifer sp. LCM 4579, particularly its single replicon, highlight its potential for adaptability in diverse environments. Understanding these traits can inform studies on microbial ecology and the role of such organisms in their ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusEnsifer
SpeciesEnsifer sp. LCM 4579
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ensifer sp. LCM 4579 contig_9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1159548 bp

Thymine Count

1160864 bp

Guanine Count

1902015 bp

Cytosine Count

1914834 bp

Genome Length

6137409 bp

Protein-coding Genes

5356 genes

Non-Coding Genes

144 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3,4-dihydroxyphenylacetate 2,3-dioxygenaseLCM4579_03975Not AvailablePositive2860022 - 286100237363.3
amino acid decarboxylaseLCM4579_03980Not AvailablePositive2861080 - 286249551585.5
2-hydroxyhepta-2,4-diene-1,7-dioate isomeraseLCM4579_03985Not AvailablePositive2862509 - 286338732278.3
2-oxo-hepta-3-ene-1,7-dioic acid hydrataseLCM4579_03990Not AvailablePositive2863381 - 286418428830.6
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolaseLCM4579_03995Not AvailablePositive2864297 - 286510328273.2
homoprotocatechuate degradation operon regulator, hparLCM4579_04000Not AvailableNegative2865097 - 286560318610.4
serine kinaseLCM4579_04005Not AvailableNegative2865850 - 286713043264.1
hydroxypyruvate isomeraseLCM4579_04010Not AvailableNegative2867134 - 286791028663.1
3-hydroxyisobutyrate dehydrogenaseLCM4579_04015Not AvailableNegative2867921 - 286884731608.1
laci family transcriptional regulatorLCM4579_04020Not AvailablePositive2868983 - 287000536274.3

Displaying genes 2671 – 2680 of 5500 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.