Pseudomonas sp. 58 R 3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. 58 R 3 is characterized by having a single replicon, which is an important trait for its genomic structure and stability. This organism is cataloged under the accession number CVTT00000000.1, indicating its availability in genomic databases for further research and analysis. The single replicon suggests a streamlined genome organization, which may contribute to its adaptability and efficiency in various environments. Pseudomonas species are widely recognized for their metabolic versatility and are often found in diverse ecological niches, including soil, water, and even as plant pathogens or symbionts. This adaptability is crucial for survival and competitiveness in fluctuating environmental conditions. Understanding the genomic features of Pseudomonas sp. 58 R 3 helps in elucidating its potential roles in microbiological processes and ecological interactions. The organism’s traits may provide insights into bioremediation capabilities or plant growth promotion, given the known abilities of many Pseudomonas species to degrade pollutants or enhance nutrient availability in soil. Thus, the study of Pseudomonas sp. 58 R 3 could contribute to the development of sustainable agricultural practices or environmental management strategies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. 58 R 3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. 58 R 3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. 58 R 3 isolate 58 R 3 genome assembly, contig:

Gene Summary

Adenine Count

1329765 bp

Thymine Count

1322159 bp

Guanine Count

1993968 bp

Cytosine Count

2008250 bp

Genome Length

6664133 bp

Protein-coding Genes

5914 genes

Non-Coding Genes

136 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
spermidine/putrescine import atp-binding protein potaNONENot AvailableNegative2178438 - 217955040797.3
response regulator uvryNONENot AvailableNegative2179888 - 218051722709.9
sensor histidine kinase liasNONENot AvailableNegative2180536 - 218253073913.2
putative esterase of the alpha/beta hydrolase fold proteinNONENot AvailablePositive2182608 - 218358234834.9
dnaj-like protein djlaNONENot AvailableNegative2183634 - 218440128468.3
glucose-1-phosphate thymidylyltransferaseNONENot AvailableNegative2184403 - 218508024059.1
putative phosphotransferase related to ser/thr protein kinasesNONENot AvailableNegative2185077 - 218610239127.0
organic solvent tolerance proteinNONENot AvailablePositive2186233 - 2189043105553.0
peptidyl-prolyl cis-trans isomerase suraNONENot AvailablePositive2189018 - 219035849146.5
4-hydroxythreonine-4-phosphate dehydrogenase 1NONENot AvailablePositive2190355 - 219134435134.7

Displaying genes 2041 – 2050 of 6050 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.