Phaeobacter porticola str. P97

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Phaeobacter

Description

Phaeobacter porticola str. P97 is a Gram-negative, rod-shaped bacterium. This organism is characterized by having four replicons, which are circular DNA molecules that can include chromosomes and plasmids. The presence of multiple replicons may suggest a complex genetic architecture that could contribute to its adaptability and survival in diverse environments. The genomic data for Phaeobacter porticola str. P97 is available under several accession numbers: NZ_CP016366.1, NZ_CP016364.1, NZ_CP016368.1, and NZ_CP016369.1. These accessions provide a gateway to further research into its genetic makeup and functional capabilities. As a member of the Phaeobacter genus, P. porticola is likely to play a role in marine ecosystems, potentially influencing nutrient cycling and interactions with other microorganisms. Its Gram-negative nature may also indicate that it possesses features such as an outer membrane, which can be linked to its ability to handle environmental stressors. In summary, the structural and genomic characteristics of Phaeobacter porticola str. P97 highlight its potential ecological significance. Understanding these traits may provide insights into its role within marine microbiomes, particularly in terms of its interactions with other microbial populations and its contributions to biogeochemical processes in aquatic environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPhaeobacter
SpeciesPhaeobacter porticola
StrainP97

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phaeobacter porticola strain P97 plasmid pP97_d, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

51 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cu(i)-responsive transcriptional regulatorPhaeoP97_RS00945Not AvailablePositive222178 - 22262116205.2
3-keto-5-aminohexanoate cleavage proteinPhaeoP97_RS00950Not AvailableNegative222922 - 22375830254.1
protocatechuate 3,4-dioxygenase subunit alphaPhaeoP97_RS00955Not AvailableNegative223769 - 22443124154.2
protocatechuate 3,4-dioxygenase subunit betaPhaeoP97_RS00960Not AvailableNegative224431 - 22515626890.0
4-carboxymuconolactone decarboxylasePhaeoP97_RS00965Not AvailableNegative225143 - 22555615005.6
pca operon transcription factor pcaqPhaeoP97_RS00970Not AvailablePositive225643 - 22656033051.4
branched-chain amino acid abc transporter permeasePhaeoP97_RS00975Not AvailablePositive226792 - 22766730615.4
branched-chain amino acid abc transporter permeasePhaeoP97_RS00980Not AvailablePositive227672 - 22875739477.8
abc transporter atp-binding proteinPhaeoP97_RS00985Not AvailablePositive228754 - 22952127993.8
abc transporter atp-binding proteinPhaeoP97_RS00990Not AvailablePositive229521 - 23029428896.3

Displaying genes 471 – 480 of 3738 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.