Phaeobacter porticola str. P97

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Phaeobacter

Description

Phaeobacter porticola str. P97 is a Gram-negative, rod-shaped bacterium. This organism is characterized by having four replicons, which are circular DNA molecules that can include chromosomes and plasmids. The presence of multiple replicons may suggest a complex genetic architecture that could contribute to its adaptability and survival in diverse environments. The genomic data for Phaeobacter porticola str. P97 is available under several accession numbers: NZ_CP016366.1, NZ_CP016364.1, NZ_CP016368.1, and NZ_CP016369.1. These accessions provide a gateway to further research into its genetic makeup and functional capabilities. As a member of the Phaeobacter genus, P. porticola is likely to play a role in marine ecosystems, potentially influencing nutrient cycling and interactions with other microorganisms. Its Gram-negative nature may also indicate that it possesses features such as an outer membrane, which can be linked to its ability to handle environmental stressors. In summary, the structural and genomic characteristics of Phaeobacter porticola str. P97 highlight its potential ecological significance. Understanding these traits may provide insights into its role within marine microbiomes, particularly in terms of its interactions with other microbial populations and its contributions to biogeochemical processes in aquatic environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPhaeobacter
SpeciesPhaeobacter porticola
StrainP97

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phaeobacter porticola strain P97 plasmid pP97_d, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

51 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
heparinase ii/iii family proteinPhaeoP97_RS15735Not AvailableNegative3289507 - 329124963549.4
rsmb/nop family class i sam-dependent rna methyltransferasePhaeoP97_RS15740Not AvailableNegative3291383 - 329264845131.4
duf1674 domain-containing proteinPhaeoP97_RS15745Not AvailablePositive3292739 - 32929336937.93
hypothetical proteinPhaeoP97_RS15750Not AvailablePositive3293052 - 32932858649.31
4-hydroxy-tetrahydrodipicolinate reductasePhaeoP97_RS15755Not AvailableNegative3293289 - 329412528781.4
30s ribosome-binding factor rbfaPhaeoP97_RS15760Not AvailablePositive3294239 - 329463414877.0
phosphodiester glycosidase family proteinPhaeoP97_RS15765Not AvailablePositive3294646 - 329538926867.9
trna pseudouridine(55) synthase trubPhaeoP97_RS15770Not AvailablePositive3295531 - 329643632213.3
duf1643 domain-containing proteinPhaeoP97_RS15775Not AvailablePositive3296480 - 329699819061.4
calcium-binding proteinPhaeoP97_RS15780Not AvailablePositive3297101 - 329815635550.4

Displaying genes 3341 – 3350 of 3738 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.